dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000004658_89|CGC1
Gene ID: MGYG000004658_02311
Location and strand information: 21234 - 22988 (+)
Family: 3.A.2.3.3
Protein type: TC
Protein description: V-type sodium ATPase catalytic subunit A

Gene clsuter ID: MGYG000004658_89|CGC1
Gene ID: MGYG000004658_02312
Location and strand information: 22999 - 24321 (+)
Family: 3.A.2.3.3
Protein type: TC
Protein description: V-type sodium ATPase subunit B

Gene clsuter ID: MGYG000004658_89|CGC1
Gene ID: MGYG000004658_02313
Location and strand information: 24328 - 24936 (+)
Family: null
Protein type: null
Protein description: V-type ATP synthase subunit D

Gene clsuter ID: MGYG000004658_89|CGC1
Gene ID: MGYG000004658_02314
Location and strand information: 24933 - 26780 (+)
Family: 3.A.2.3.3
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004658_89|CGC1
Gene ID: MGYG000004658_02315
Location and strand information: 26802 - 27257 (+)
Family: null
Protein type: null
Protein description: V-type sodium ATPase subunit K

Gene clsuter ID: MGYG000004658_89|CGC1
Gene ID: MGYG000004658_02316
Location and strand information: 27445 - 30651 (+)
Family: GH38
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.616
Protein molecular weight: 118468.18
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004658_89|CGC1
Gene ID: MGYG000004658_02317
Location and strand information: 31152 - 34283 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000004658_89|CGC1
Gene ID: MGYG000004658_02318
Location and strand information: 34299 - 35951 (+)
Family: 8.A.46.1.3
Protein type: TC
Protein description: SusD-like protein

Gene clsuter ID: MGYG000004658_89|CGC1
Gene ID: MGYG000004658_02319
Location and strand information: 35979 - 37103 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004658_89|CGC1
Gene ID: MGYG000004658_02320
Location and strand information: 37119 - 39260 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004658_89|CGC1
Gene ID: MGYG000004658_02321
Location and strand information: 39325 - 40536 (+)
Family: GH76
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.5381
Protein molecular weight: 45240.37
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004658_89|CGC1
Gene ID: MGYG000004658_02322
Location and strand information: 40836 - 44894 (-)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000004658_89|CGC1
Gene ID: MGYG000004658_02323
Location and strand information: 45171 - 45890 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004658_89|CGC1
Gene ID: MGYG000004658_02324
Location and strand information: 45901 - 47091 (+)
Family: GH76
Protein type: CAZyme
Protein description: Cellobiose 2-epimerase
Protein isoelectric point: 4.6088
Protein molecular weight: 43846.08
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004658_89|CGC1
Gene ID: MGYG000004658_02325
Location and strand information: 47126 - 48658 (+)
Family: GH125
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.1603
Protein molecular weight: 57300.25
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004658_89|CGC1
Gene ID: MGYG000004658_02326
Location and strand information: 48725 - 50668 (+)
Family: GH97
Protein type: CAZyme
Protein description: Retaining alpha-galactosidase
Protein isoelectric point: 4.9092
Protein molecular weight: 72852.89
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000004658_02316	GH38_e31\|3.2.1.113\|3.2.1.-	hostglycan\|alpha-mannan
MGYG000004658_02321	GH76_e32
MGYG000004658_02324	GH76_e1\|3.2.1.101	alpha-mannan
MGYG000004658_02325	GH125_e1\|3.2.1.-	alpha-mannan
MGYG000004658_02326	GH97_e20\|3.2.1.22	alpha-glucan

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is alpha-mannan

Substrate predicted by dbCAN-PUL is alpha-mannan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000004658_02311	V-type sodium ATPase catalytic subunit A	TC	21234	22988	+	3.A.2.3.3
MGYG000004658_02312	V-type sodium ATPase subunit B	TC	22999	24321	+	3.A.2.3.3
MGYG000004658_02313	V-type ATP synthase subunit D	null	24328	24936	+	ATP-synt_D
MGYG000004658_02314	hypothetical protein	TC	24933	26780	+	3.A.2.3.3
MGYG000004658_02315	V-type sodium ATPase subunit K	null	26802	27257	+	ATP-synt_C\| ATP-synt_C
MGYG000004658_02316	hypothetical protein	CAZyme	27445	30651	+	GH38
MGYG000004658_02317	TonB-dependent receptor SusC	TC	31152	34283	+	1.B.14.6.1
MGYG000004658_02318	SusD-like protein	TC	34299	35951	+	8.A.46.1.3
MGYG000004658_02319	hypothetical protein	null	35979	37103	+	SusE
MGYG000004658_02320	hypothetical protein	null	37119	39260	+	SusE\| SusE
MGYG000004658_02321	hypothetical protein	CAZyme	39325	40536	+	GH76
MGYG000004658_02322	Sensor histidine kinase RcsC	TF	40836	44894	-	HTH_AraC
MGYG000004658_02323	hypothetical protein	null	45171	45890	+	Lipase_GDSL_2
MGYG000004658_02324	Cellobiose 2-epimerase	CAZyme	45901	47091	+	GH76
MGYG000004658_02325	hypothetical protein	CAZyme	47126	48658	+	GH125
MGYG000004658_02326	Retaining alpha-galactosidase	CAZyme	48725	50668	+	GH97
Protein ID	Protein Name	Type	Start	End	Strand	Signature